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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
62
total RNA-seq
52
ATAC-seq
38
DNase-seq
4
Hi-C
2
single cell RNA-seq
1
WGBS
Assay category
90
DNA accessibility
64
Transcription
4
3D chromatin structure
1
DNA methylation
Date released
66
February, 2021
35
February, 2023
34
June, 2019
10
October, 2019
8
July, 2019
4
February, 2020
2
August, 2021
Available data
114
bam
100
bigWig
90
bed narrowPeak
64
tsv
38
bed bed3+
38
bed broadPeak
38
bigBed broadPeak
38
bigBed narrowPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
159
Homo sapiens
Biosample type
97
tissue
60
cell line
2
primary cell
Organ
728
pancreas
531
connective tissue
418
adipose tissue
395
epithelium
302
kidney
259
heart
239
liver
159
bone element
134
vasculature
131
blood vessel
107
artery
68
brain
57
musculature of body
56
eye
56
limb
20
lung
18
ureter
16
skeleton
15
embryo
9
blood
9
bodily fluid
8
nerve
5
spleen
5
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
159
AMP
Genome assembly (visualization)
149
GRCh38
113
hg19
Lab
159
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
159 results
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total RNA-seq
ATAC-seq
DNase-seq
Hi-C
single cell RNA-seq
WGBS
tissue
coronary artery
1
36
2
muscle of arm
17
muscle of leg
13
1
tibial nerve
5
1
2
gastrocnemius medialis
1
4
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cell line
smooth muscle cell of the coronary artery
52
8
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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