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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
45
ATAC-seq
34
ChIP-seq
DNase-seq
2
single cell RNA-seq
Assay category
56
Transcription
45
DNA accessibility
34
DNA binding
Target of assay
20
histone
20
histone modification
14
broad histone mark
9
control
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
66
February, 2021
35
February, 2023
24
October, 2019
5
May, 2019
2
August, 2021
2
February, 2020
1
July, 2019
Available data
96
bam
79
bigWig
70
bed narrowPeak
56
tsv
21
bigBed narrowPeak
6
tagAlign
Organism
135
Homo sapiens
Biosample type
69
tissue
66
cell line
primary cell
Organ
773
liver
642
connective tissue
592
pancreas
487
adipose tissue
313
heart
249
kidney
238
brain
194
blood vessel
194
vasculature
158
bone element
135
artery
117
epithelium
86
limb
61
blood
61
bodily fluid
53
eye
50
musculature of body
41
nerve
37
embryo
24
spleen
20
lung
16
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
135
AMP
Genome assembly (visualization)
122
GRCh38
87
hg19
Lab
135
AMP-T2D consortium
assay_title!
DNase-seq
biosample_type!
primary cell
BIOSAMPLE
ASSAY
135 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
single cell RNA-seq
tissue
coronary artery
1
36
5
tibial artery
1
1
23
pulmonary artery
2
cell line
smooth muscle cell of the coronary artery
52
8
6
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