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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
45
ATAC-seq
ChIP-seq
4
DNase-seq
single cell RNA-seq
Assay category
56
Transcription
49
DNA accessibility
Date released
60
February, 2021
35
February, 2023
3
July, 2019
3
October, 2019
2
February, 2020
2
June, 2019
Available data
68
bam
60
bigWig
56
tsv
49
bed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
bigBed narrowPeak
Organism
105
Homo sapiens
Biosample type
60
cell line
43
tissue
2
primary cell
Organ
654
pancreas
527
connective tissue
418
adipose tissue
325
epithelium
238
kidney
238
liver
166
heart
159
bone element
128
vasculature
125
blood vessel
105
artery
65
brain
56
eye
56
limb
56
musculature of body
18
ureter
16
skeleton
15
embryo
11
lung
9
blood
9
bodily fluid
8
nerve
5
spleen
5
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
105
AMP
Genome assembly (visualization)
103
GRCh38
68
hg19
Lab
105
AMP-T2D consortium
assay_title!
single cell RNA-seq
ChIP-seq
BIOSAMPLE
ASSAY
105 results
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total RNA-seq
ATAC-seq
DNase-seq
cell line
smooth muscle cell of the coronary artery
52
8
tissue
coronary artery
1
36
2
tibial artery
1
1
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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