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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
9
ChIP-seq
6
total RNA-seq
4
ATAC-seq
2
single cell RNA-seq
1
pCHi-C
Assay category
9
DNA binding
8
Transcription
4
DNA accessibility
Target of assay
9
control
Date released
86
February, 2021
8
February, 2023
5
October, 2019
2
August, 2021
2
February, 2020
2
May, 2019
1
May, 2021
Available data
88
txt
9
bam
4
bed bed3
4
tsv
2
tagAlign
Organism
106
Homo sapiens
Biosample type
103
tissue
2
cell line
1
primary cell
Organ
311
pancreas
260
liver
230
epithelium
149
kidney
127
heart
118
connective tissue
93
bone element
69
brain
67
adipose tissue
55
eye
45
vasculature
43
blood vessel
43
musculature of body
26
limb
20
lung
15
blood
15
bodily fluid
13
artery
12
nerve
10
vein
9
spleen
8
embryo
8
skeleton
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
105
AMP
1
T1D
Genome assembly (visualization)
GRCh38
163
hg19
Lab
105
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
assembly!
GRCh38
BIOSAMPLE
ASSAY
106 results
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RNA microarray
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
pCHi-C
tissue
bone element
84
tibial artery
5
1
coronary artery
2
1
acetabular part of hip bone
1
1
ilium
1
1
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cell line
smooth muscle cell of the coronary artery
2
primary cell
megakaryocyte
1
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