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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ATAC-seq
28
ChIP-seq
4
total RNA-seq
2
single cell RNA-seq
Assay category
37
DNA accessibility
28
DNA binding
6
Transcription
Target of assay
20
histone
20
histone modification
14
broad histone mark
7
control
6
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
35
February, 2023
24
October, 2019
5
May, 2019
3
July, 2019
2
August, 2021
2
February, 2020
Available data
62
bed narrowPeak
36
bam
29
bigWig
25
bigBed narrowPeak
6
tsv
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
71
Homo sapiens
Biosample type
69
tissue
cell line
2
primary cell
Organ
827
pancreas
657
connective tissue
485
adipose tissue
424
epithelium
378
liver
257
heart
257
kidney
251
brain
159
bone element
157
vasculature
153
blood vessel
86
limb
71
artery
62
musculature of body
57
eye
41
nerve
26
embryo
24
spleen
20
lung
20
vein
16
skeleton
8
blood
8
bodily fluid
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
71
AMP
Genome assembly (visualization)
60
GRCh38
25
hg19
Lab
71
AMP-T2D consortium
biosample_type!
cell line
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
71 results
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Clear Filters
ATAC-seq
ChIP-seq
total RNA-seq
single cell RNA-seq
tissue
coronary artery
36
5
1
tibial artery
1
23
1
pulmonary artery
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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