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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
45
ATAC-seq
ChIP-seq
4
DNase-seq
2
single cell RNA-seq
Assay category
56
Transcription
49
DNA accessibility
Date released
60
February, 2021
35
February, 2023
3
October, 2019
2
August, 2021
2
February, 2020
2
June, 2019
1
July, 2019
Available data
66
bam
58
bigWig
56
tsv
49
bed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
bigBed narrowPeak
Organism
105
Homo sapiens
Biosample type
60
cell line
45
tissue
primary cell
Organ
504
connective tissue
452
pancreas
416
adipose tissue
281
kidney
251
heart
229
liver
158
bone element
120
blood vessel
120
vasculature
105
artery
81
epithelium
56
brain
56
limb
54
eye
53
musculature of body
20
lung
18
ureter
16
skeleton
15
embryo
8
nerve
5
spleen
2
intestine
2
thymus
1
adrenal gland
1
blood
1
bodily fluid
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
105
AMP
Genome assembly (visualization)
101
GRCh38
66
hg19
Lab
105
AMP-T2D consortium
biosample_type!
primary cell
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
105 results
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total RNA-seq
ATAC-seq
DNase-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
8
tissue
coronary artery
1
36
2
tibial artery
1
1
2
pulmonary artery
2
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