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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
63
ChIP-seq
38
ATAC-seq
7
total RNA-seq
6
DNase-seq
2
single cell RNA-seq
Assay category
63
DNA binding
44
DNA accessibility
9
Transcription
Target of assay
44
histone
44
histone modification
30
broad histone mark
18
control
14
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
68
October, 2019
35
February, 2023
5
May, 2019
3
February, 2020
2
August, 2021
2
June, 2019
1
July, 2019
Available data
89
bed narrowPeak
76
bam
58
bigWig
51
bigBed narrowPeak
9
tsv
6
bed bed3+
6
bed broadPeak
6
bigBed broadPeak
Organism
116
Homo sapiens
Biosample type
116
tissue
66
cell line
2
primary cell
Organ
547
connective tissue
505
pancreas
488
adipose tissue
361
liver
299
kidney
273
heart
265
brain
158
bone element
133
blood vessel
133
vasculature
122
limb
82
musculature of body
73
artery
56
eye
43
nerve
25
spleen
20
lung
18
ureter
16
skeleton
15
epithelium
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
116
AMP
Genome assembly (visualization)
93
GRCh38
58
hg19
Lab
116
AMP-T2D consortium
BIOSAMPLE
ASSAY
116 results
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ChIP-seq
ATAC-seq
total RNA-seq
DNase-seq
single cell RNA-seq
tissue
coronary artery
5
36
1
2
tibial nerve
35
1
5
2
tibial artery
23
1
1
2
pulmonary artery
2
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