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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ATAC-seq
28
ChIP-seq
22
DNase-seq
2
single cell RNA-seq
2
total RNA-seq
Assay category
59
DNA accessibility
28
DNA binding
4
Transcription
Target of assay
20
histone
20
histone modification
14
broad histone mark
7
control
6
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
35
February, 2023
26
October, 2019
20
June, 2019
5
May, 2019
2
August, 2021
2
February, 2020
1
July, 2019
Available data
80
bed narrowPeak
52
bam
45
bigWig
43
bigBed narrowPeak
22
bed bed3+
22
bed broadPeak
22
bigBed broadPeak
4
tsv
Organism
91
Homo sapiens
Biosample type
91
tissue
66
cell line
2
primary cell
Organ
547
connective tissue
505
pancreas
488
adipose tissue
361
liver
299
kidney
273
heart
265
brain
158
bone element
133
blood vessel
133
vasculature
122
limb
82
musculature of body
73
artery
56
eye
43
nerve
25
spleen
20
lung
18
ureter
16
skeleton
15
epithelium
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
91
AMP
Genome assembly (visualization)
80
GRCh38
45
hg19
Lab
91
AMP-T2D consortium
BIOSAMPLE
ASSAY
91 results
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ATAC-seq
ChIP-seq
DNase-seq
single cell RNA-seq
total RNA-seq
tissue
coronary artery
36
5
2
1
tibial artery
1
23
2
1
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
pulmonary artery
2
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