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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
7
ChIP-seq
2
single cell RNA-seq
Assay category
58
Transcription
7
DNA binding
Target of assay
7
control
Date released
54
February, 2021
5
October, 2019
2
August, 2021
2
February, 2020
2
July, 2019
May, 2019
Available data
97
bam
82
bigWig
bed narrowPeak
58
tsv
22
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
65
Homo sapiens
Biosample type
54
cell line
9
tissue
2
primary cell
Organ
731
pancreas
609
connective tissue
478
adipose tissue
372
epithelium
350
liver
196
heart
170
kidney
151
bone element
92
vasculature
90
blood vessel
80
brain
65
artery
35
musculature of body
29
limb
28
eye
23
embryo
20
lung
16
nerve
15
blood
15
bodily fluid
11
spleen
9
vein
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
65
AMP
Genome assembly (visualization)
54
GRCh38
54
hg19
Lab
65
AMP-T2D consortium
files.file_type!
bed narrowPeak
month_released!
May, 2019
BIOSAMPLE
ASSAY
65 results
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total RNA-seq
ChIP-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
2
tissue
tibial artery
1
5
pulmonary artery
2
coronary artery
1
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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