Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
ATAC-seq
34
ChIP-seq
2
single cell RNA-seq
Assay category
58
Transcription
34
DNA binding
Target of assay
20
histone
20
histone modification
14
broad histone mark
9
control
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
58
February, 2021
23
October, 2019
5
May, 2019
2
August, 2021
2
February, 2020
2
July, 2019
Available data
92
bam
83
bigWig
58
tsv
29
bed narrowPeak
25
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
bigBed broadPeak
Organism
92
Homo sapiens
Biosample type
58
cell line
32
tissue
2
primary cell
Organ
787
pancreas
705
liver
650
connective tissue
483
adipose tissue
399
epithelium
276
heart
244
brain
201
kidney
173
vasculature
171
blood vessel
147
bone element
92
artery
78
limb
68
blood
68
bodily fluid
62
musculature of body
40
nerve
37
embryo
29
eye
23
spleen
20
lung
18
vein
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
92
AMP
Genome assembly (visualization)
79
GRCh38
79
hg19
Lab
92
AMP-T2D consortium
files.file_type!
bigBed broadPeak
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
92 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
6
tissue
tibial artery
1
23
coronary artery
1
5
pulmonary artery
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
Download