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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
28
ChIP-seq
10
ATAC-seq
4
DNase-seq
Assay category
54
Transcription
28
DNA binding
14
DNA accessibility
Target of assay
20
histone
20
histone modification
14
broad histone mark
7
control
6
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
60
February, 2021
26
October, 2019
5
May, 2019
3
July, 2019
2
June, 2019
Available data
102
bam
85
bigWig
74
bed narrowPeak
58
tsv
25
bigBed narrowPeak
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
96
Homo sapiens
Biosample type
60
cell line
34
tissue
2
primary cell
Organ
679
pancreas
615
liver
593
connective tissue
442
adipose tissue
310
epithelium
205
heart
179
vasculature
174
blood vessel
144
kidney
143
brain
114
limb
96
artery
66
bone element
60
blood
60
bodily fluid
57
musculature of body
42
nerve
36
embryo
24
spleen
20
vein
18
ureter
8
skeleton
7
eye
1
pericardium
Project
96
AMP
Genome assembly (visualization)
89
GRCh38
89
hg19
Lab
96
AMP-T2D consortium
files.file_type!
tagAlign
BIOSAMPLE
ASSAY
96 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
cell line
smooth muscle cell of the coronary artery
52
8
tissue
tibial artery
23
1
2
coronary artery
5
1
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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