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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
115
ChIP-seq
36
DNase-seq
1
FAIRE-seq
Assay category
115
DNA binding
37
DNA accessibility
Target of assay
111
histone
111
histone modification
72
broad histone mark
39
narrow histone mark
4
RNA binding protein
4
transcription factor
Date released
63
November, 2017
32
June, 2019
28
May, 2019
20
October, 2019
6
October, 2017
2
November, 2018
1
July, 2019
Available data
345
bam
307
bigWig
277
bed narrowPeak
152
bigBed narrowPeak
124
tagAlign
84
tsv
51
bed broadPeak
42
bigBed broadPeak
39
bed bed3+
21
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
152
Homo sapiens
Biosample type
141
tissue
11
primary cell
Organ
358
liver
127
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
152
AMP
Genome assembly (visualization)
151
GRCh38
90
hg19
Lab
152
AMP-T2D consortium
Audit category:
3
missing controlled_by
BIOSAMPLE
ASSAY
152 results
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ChIP-seq
DNase-seq
FAIRE-seq
tissue
brain
6
14
tibial artery
18
2
layer of hippocampus
16
caudate nucleus
12
1
temporal lobe
13
+ See 16 more…
primary cell
astrocyte of the cerebellum
2
1
brain microvascular endothelial cell
2
1
choroid plexus epithelial cell
2
1
astrocyte of the hippocampus
1
brain pericyte
1
See all biosamples
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