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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
ChIP-seq
6
DNase-seq
1
FAIRE-seq
Assay category
31
DNA binding
7
DNA accessibility
Target of assay
30
histone
30
histone modification
19
broad histone mark
11
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
33
October, 2019
3
May, 2019
2
June, 2019
Available data
122
bam
100
bigWig
87
bed narrowPeak
58
tsv
38
bigBed narrowPeak
8
bed broadPeak
8
bigBed broadPeak
6
bed bed3+
6
tagAlign
2
hic
1
bedpe bed3+
1
tar
Organism
38
Homo sapiens
Biosample type
25
tissue
13
primary cell
Organ
358
liver
127
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
38
AMP
Genome assembly (visualization)
38
hg19
37
GRCh38
Lab
38
AMP-T2D consortium
BIOSAMPLE
ASSAY
38 results
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ChIP-seq
DNase-seq
FAIRE-seq
tissue
tibial artery
18
2
coronary artery
3
2
primary cell
endothelial cell of umbilical vein
10
2
1
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