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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
34
ChIP-seq
22
DNase-seq
10
ATAC-seq
2
single cell RNA-seq
Assay category
58
Transcription
34
DNA binding
32
DNA accessibility
Target of assay
20
histone
20
histone modification
14
broad histone mark
9
control
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
66
February, 2021
February, 2023
26
October, 2019
20
June, 2019
5
May, 2019
3
July, 2019
2
August, 2021
2
February, 2020
Available data
120
bam
103
bigWig
58
tsv
57
bed narrowPeak
43
bigBed narrowPeak
22
bed bed3+
22
bed broadPeak
22
bigBed broadPeak
6
tagAlign
Organism
124
Homo sapiens
Biosample type
66
cell line
56
tissue
2
primary cell
Organ
890
pancreas
791
liver
670
connective tissue
490
adipose tissue
472
epithelium
354
kidney
317
heart
285
brain
201
vasculature
195
blood vessel
151
bone element
122
limb
106
artery
96
musculature of body
69
blood
69
bodily fluid
43
nerve
37
embryo
30
eye
25
spleen
22
vein
20
lung
18
ureter
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
124
AMP
Genome assembly (visualization)
111
GRCh38
111
hg19
Lab
124
AMP-T2D consortium
month_released!
February, 2023
BIOSAMPLE
ASSAY
124 results
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total RNA-seq
ChIP-seq
DNase-seq
ATAC-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
6
8
tissue
tibial artery
1
23
2
1
renal pelvis
10
coronary artery
1
5
2
1
left renal pelvis
4
right renal pelvis
4
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primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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