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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
45
ATAC-seq
25
ChIP-seq
2
DNase-seq
Assay category
54
Transcription
47
DNA accessibility
25
DNA binding
Target of assay
20
histone
20
histone modification
14
broad histone mark
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
64
February, 2021
35
February, 2023
21
October, 2019
3
July, 2019
3
May, 2019
June, 2019
Available data
91
bam
83
bigWig
72
bed narrowPeak
54
tsv
23
bigBed narrowPeak
4
tagAlign
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
126
Homo sapiens
Biosample type
64
cell line
60
tissue
2
primary cell
Organ
631
pancreas
551
connective tissue
529
liver
423
adipose tissue
276
epithelium
193
heart
187
brain
184
vasculature
182
blood vessel
126
artery
125
kidney
66
bone element
64
limb
54
blood
54
bodily fluid
31
nerve
29
embryo
16
spleen
12
musculature of body
12
vein
8
skeleton
1
pericardium
1
pituitary gland
Project
126
AMP
Genome assembly (visualization)
126
GRCh38
91
hg19
Lab
126
AMP-T2D consortium
month_released!
June, 2019
BIOSAMPLE
ASSAY
126 results
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total RNA-seq
ATAC-seq
ChIP-seq
DNase-seq
cell line
smooth muscle cell of the coronary artery
52
8
4
tissue
coronary artery
36
3
tibial artery
1
18
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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