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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
ATAC-seq
11
single cell RNA-seq
10
snATAC-seq
9
ChIP-seq
2
total RNA-seq
1
pCHi-C
Assay category
53
DNA accessibility
13
Transcription
9
DNA binding
Target of assay
9
control
Date released
35
February, 2023
19
April, 2020
10
February, 2021
5
October, 2019
2
August, 2021
2
February, 2020
2
May, 2019
1
March, 2020
Available data
102
bam
bigWig
74
bed narrowPeak
59
tsv
25
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
75
Homo sapiens
Biosample type
66
tissue
10
cell line
Organ
323
pancreas
223
epithelium
223
kidney
169
heart
169
liver
114
connective tissue
101
bone element
81
vasculature
80
blood vessel
66
adipose tissue
64
brain
56
artery
55
eye
31
limb
28
musculature of body
20
lung
16
skeleton
14
blood
14
bodily fluid
nerve
9
spleen
8
embryo
7
vein
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
57
AMP
19
LungMap
Genome assembly (visualization)
43
GRCh38
8
hg19
Lab
57
AMP-T2D consortium
19
Xin Sun, UCSD
organ_slims!
nerve
files.file_type!
bigWig
BIOSAMPLE
ASSAY
76 results
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ATAC-seq
single cell RNA-seq
snATAC-seq
ChIP-seq
total RNA-seq
pCHi-C
tissue
coronary artery
35
2
1
lung
9
10
1
tibial artery
5
1
pulmonary artery
2
cell line
smooth muscle cell of the coronary artery
8
2
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