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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
79
ChIP-seq
54
total RNA-seq
4
DNase-seq
3
ATAC-seq
Assay category
79
DNA binding
54
Transcription
7
DNA accessibility
Target of assay
56
transcription factor
21
histone
21
histone modification
14
broad histone mark
11
RNA binding protein
10
chromatin remodeller
7
narrow histone mark
Date released
56
February, 2021
27
December, 2018
21
October, 2019
15
January, 2019
12
November, 2018
3
July, 2019
3
May, 2019
2
June, 2019
1
January, 2018
Available data
162
bam
140
bigWig
128
bed narrowPeak
79
bigBed narrowPeak
60
fastq
58
tsv
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
140
Homo sapiens
Biosample type
111
cell line
27
tissue
2
primary cell
Organ
623
pancreas
622
liver
570
connective tissue
425
adipose tissue
301
epithelium
222
brain
184
heart
155
vasculature
150
blood vessel
131
kidney
91
limb
85
artery
68
musculature of body
58
bone element
55
blood
55
bodily fluid
31
nerve
29
embryo
18
ureter
16
spleen
15
vein
6
eye
1
pericardium
1
pituitary gland
Project
140
AMP
Genome assembly (visualization)
140
hg19
139
GRCh38
Lab
140
AMP-T2D consortium
Audit category:
1
inconsistent control
BIOSAMPLE
ASSAY
140 results
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Clear Filters
ChIP-seq
total RNA-seq
DNase-seq
ATAC-seq
cell line
smooth muscle cell of the coronary artery
4
52
GM12878
54
1
tissue
tibial artery
18
2
1
coronary artery
3
2
1
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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