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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
68
ATAC-seq
10
DNase-seq
Assay category
586
DNA binding
251
Transcription
78
DNA accessibility
7
DNA methylation
4
3D chromatin structure
1
DNA sequencing
Date released
35
February, 2023
20
May, 2022
9
February, 2021
4
June, 2019
4
October, 2019
3
November, 2018
2
August, 2017
1
July, 2019
Available data
77
bed narrowPeak
32
bigWig
22
bam
10
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
4
fastq
1
bed bed3
Organism
78
Homo sapiens
Biosample type
66
tissue
9
cell line
3
primary cell
Organ
173
pancreas
163
kidney
123
epithelium
77
heart
58
vasculature
56
blood vessel
49
artery
44
limb
37
brain
35
musculature of body
34
connective tissue
32
eye
29
liver
18
ureter
12
bone element
12
skeleton
10
lung
9
blood
9
bodily fluid
8
adipose tissue
3
nerve
3
vein
2
spleen
1
pituitary gland
1
skin of body
Project
78
AMP
Genome assembly (visualization)
57
GRCh38
42
hg19
Lab
58
AMP-T2D consortium
20
Karen Mohlke, UNC
Audit category:
1
inconsistent ontology term
1
inconsistent replicate
BIOSAMPLE
ASSAY
78 results
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ATAC-seq
DNase-seq
tissue
coronary artery
36
2
liver
20
2
right lobe of liver
1
2
tibial artery
1
2
cell line
smooth muscle cell of the coronary artery
8
HepG2
1
primary cell
Liver fetal (hepatocyte)
1
hepatic stellate cell
1
hepatocyte
1
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