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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
ATAC-seq
20
ChIP-seq
3
total RNA-seq
2
single cell RNA-seq
Assay category
43
DNA accessibility
20
DNA binding
5
Transcription
Target of assay
20
control
Date released
35
February, 2023
16
October, 2019
10
February, 2021
3
February, 2020
2
August, 2021
2
May, 2019
Available data
144
bam
bigWig
101
bed narrowPeak
63
tsv
51
bigBed narrowPeak
6
bed bed3+
6
bed broadPeak
6
bigBed broadPeak
6
tagAlign
Organism
68
Homo sapiens
Biosample type
58
tissue
10
cell line
Organ
323
pancreas
223
epithelium
223
kidney
169
heart
169
liver
114
connective tissue
101
bone element
81
vasculature
80
blood vessel
66
adipose tissue
64
brain
56
artery
55
eye
31
limb
28
musculature of body
20
lung
16
skeleton
14
blood
14
bodily fluid
12
nerve
9
spleen
8
embryo
7
vein
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
68
AMP
Genome assembly (visualization)
43
GRCh38
8
hg19
Lab
68
AMP-T2D consortium
files.file_type!
bigWig
BIOSAMPLE
ASSAY
68 results
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ATAC-seq
ChIP-seq
total RNA-seq
single cell RNA-seq
tissue
coronary artery
35
2
1
tibial nerve
11
1
tibial artery
5
1
pulmonary artery
2
cell line
smooth muscle cell of the coronary artery
8
2
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