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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
ATAC-seq
17
ChIP-seq
2
single cell RNA-seq
2
total RNA-seq
1
pCHi-C
Assay category
43
DNA accessibility
17
DNA binding
4
Transcription
Target of assay
17
control
Date released
35
February, 2023
10
February, 2021
5
October, 2019
4
December, 2018
3
November, 2018
2
August, 2021
2
February, 2020
2
May, 2019
1
January, 2019
1
March, 2020
Available data
126
bam
bigWig
88
bed narrowPeak
59
tsv
38
bigBed narrowPeak
24
fastq
6
tagAlign
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
2
bed bedMethyl
bigBed bedMethyl
Organism
65
Homo sapiens
Biosample type
55
tissue
10
cell line
Organ
321
pancreas
219
kidney
217
epithelium
167
heart
167
liver
113
connective tissue
101
bone element
80
blood vessel
80
vasculature
66
adipose tissue
62
brain
56
artery
54
eye
31
limb
25
musculature of body
20
lung
16
skeleton
14
blood
14
bodily fluid
12
nerve
9
spleen
8
embryo
7
vein
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
65
AMP
Genome assembly (visualization)
43
GRCh38
8
hg19
Lab
65
AMP-T2D consortium
files.file_type!
bigBed bedMethyl
bigWig
BIOSAMPLE
ASSAY
65 results
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ATAC-seq
ChIP-seq
single cell RNA-seq
total RNA-seq
pCHi-C
tissue
coronary artery
35
2
1
spleen
8
1
tibial artery
5
1
pulmonary artery
2
cell line
smooth muscle cell of the coronary artery
8
2
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