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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
45
ATAC-seq
22
DNase-seq
2
single cell RNA-seq
Assay category
67
DNA accessibility
58
Transcription
DNA binding
Date released
60
February, 2021
35
February, 2023
20
June, 2019
3
July, 2019
3
October, 2019
2
August, 2021
2
February, 2020
Available data
86
bam
78
bigWig
67
bed narrowPeak
58
tsv
22
bed bed3+
22
bed broadPeak
22
bigBed broadPeak
22
bigBed narrowPeak
Organism
125
Homo sapiens
Biosample type
63
tissue
60
cell line
2
primary cell
Organ
728
pancreas
531
connective tissue
418
adipose tissue
395
epithelium
302
kidney
259
heart
239
liver
159
bone element
134
vasculature
131
blood vessel
107
artery
68
brain
57
musculature of body
56
eye
56
limb
20
lung
18
ureter
16
skeleton
15
embryo
9
blood
9
bodily fluid
8
nerve
5
spleen
5
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
125
AMP
Genome assembly (visualization)
121
GRCh38
86
hg19
Lab
125
AMP-T2D consortium
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
125 results
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total RNA-seq
ATAC-seq
DNase-seq
single cell RNA-seq
tissue
coronary artery
1
36
2
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
tibial artery
1
1
2
+ See 1 more…
cell line
smooth muscle cell of the coronary artery
52
8
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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