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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ChIP-seq
2
DNase-seq
2
single cell RNA-seq
1
ATAC-seq
1
pCHi-C
1
total RNA-seq
Assay category
23
DNA binding
3
DNA accessibility
3
Transcription
Target of assay
18
histone
18
histone modification
14
broad histone mark
5
control
4
narrow histone mark
Date released
26
October, 2019
2
August, 2021
1
February, 2020
1
March, 2020
Available data
26
bam
21
bed narrowPeak
21
bigWig
20
bigBed narrowPeak
4
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
30
Homo sapiens
Biosample type
30
tissue
Organ
946
pancreas
791
liver
684
connective tissue
524
epithelium
491
adipose tissue
354
kidney
heart
286
brain
236
vasculature
230
blood vessel
159
bone element
141
artery
122
limb
96
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
30
AMP
Genome assembly (visualization)
21
GRCh38
21
hg19
Lab
30
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
heart
BIOSAMPLE
ASSAY
30 results
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ChIP-seq
DNase-seq
single cell RNA-seq
ATAC-seq
pCHi-C
total RNA-seq
tissue
tibial artery
23
2
1
1
pulmonary artery
2
bladder (urinary bladder)
1
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