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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
45
ATAC-seq
11
ChIP-seq
4
DNase-seq
Assay category
54
Transcription
49
DNA accessibility
11
DNA binding
Target of assay
20
histone
20
histone modification
broad histone mark
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
64
February, 2021
35
February, 2023
7
October, 2019
3
July, 2019
3
May, 2019
2
June, 2019
Available data
79
bam
71
bigWig
60
bed narrowPeak
54
tsv
11
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
tagAlign
Organism
114
Homo sapiens
Biosample type
64
cell line
48
tissue
2
primary cell
Organ
566
pancreas
550
connective tissue
503
liver
424
adipose tissue
254
epithelium
209
heart
190
kidney
156
brain
150
vasculature
146
blood vessel
114
artery
66
bone element
62
limb
54
blood
54
bodily fluid
45
musculature of body
25
embryo
18
ureter
15
nerve
12
spleen
8
skeleton
7
vein
6
eye
1
pericardium
1
pituitary gland
Project
114
AMP
Genome assembly (visualization)
114
GRCh38
79
hg19
Lab
114
AMP-T2D consortium
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
114 results
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total RNA-seq
ATAC-seq
ChIP-seq
DNase-seq
cell line
smooth muscle cell of the coronary artery
52
8
4
tissue
coronary artery
36
3
2
tibial artery
1
4
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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