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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
DNase-seq
4
ChIP-seq
1
Hi-C
1
pCHi-C
Assay category
9
DNA accessibility
4
DNA binding
1
3D chromatin structure
Target of assay
3
histone
3
histone modification
2
narrow histone mark
transcription factor
1
broad histone mark
1
control
Date released
4
June, 2019
3
August, 2021
3
November, 2018
2
October, 2019
1
August, 2017
1
February, 2021
1
July, 2019
Available data
452
bam
369
bigWig
232
tsv
181
bed narrowPeak
138
fastq
88
tagAlign
68
bigBed narrowPeak
23
bed broadPeak
23
bigBed broadPeak
15
bed bed3+
3
bed bedMethyl
3
bigBed bedMethyl
2
bedpe bed3+
2
hic
1
bed bed3
1
csv
1
hdf5
1
vcf
Organism
15
Homo sapiens
Biosample type
8
tissue
6
primary cell
1
cell line
Organ
78
kidney
36
limb
35
brain
34
musculature of body
30
heart
22
pancreas
21
epithelium
18
ureter
17
connective tissue
13
vasculature
11
blood vessel
11
liver
4
artery
4
eye
3
embryo
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
15
AMP
Genome assembly (visualization)
15
hg19
13
GRCh38
Lab
15
AMP-T2D consortium
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
15 results
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Clear Filters
DNase-seq
ChIP-seq
Hi-C
pCHi-C
tissue
liver
2
1
coronary artery
2
tibial artery
2
right lobe of liver
1
primary cell
hepatocyte
1
3
endothelial cell of hepatic sinusoid
1
hepatic stellate cell
1
cell line
HepG2
1
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