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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
88
ChIP-seq
Assay category
88
DNA binding
Target of assay
58
histone
58
histone modification
40
narrow histone mark
30
control
18
broad histone mark
transcription factor
Date released
50
May, 2020
20
August, 2017
12
November, 2017
4
August, 2021
2
February, 2021
Available data
452
bam
369
bigWig
232
tsv
181
bed narrowPeak
138
fastq
88
tagAlign
68
bigBed narrowPeak
23
bed broadPeak
23
bigBed broadPeak
15
bed bed3+
3
bed bedMethyl
3
bigBed bedMethyl
2
bedpe bed3+
2
hic
1
bed bed3
1
csv
1
hdf5
1
vcf
Organism
88
Homo sapiens
Biosample type
70
tissue
14
cell line
4
primary cell
Organ
118
brain
86
liver
22
connective tissue
18
pancreas
15
musculature of body
8
adipose tissue
6
epithelium
2
artery
2
blood vessel
2
heart
2
vasculature
1
pituitary gland
Project
88
AMP
Genome assembly (visualization)
42
hg19
31
GRCh38
Lab
88
AMP-T2D consortium
Audit category:
11
inconsistent control read length
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
88 results
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ChIP-seq
tissue
liver
70
cell line
HepG2
12
smooth muscle cell of the coronary artery
2
primary cell
hepatocyte
4
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