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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
109
ChIP-seq
Assay category
109
DNA binding
Target of assay
109
histone
109
histone modification
57
broad histone mark
52
narrow histone mark
35
control
9
RNA binding protein
9
transcription factor
3
nucleotide modification
1
chromatin remodeller
Date released
39
October, 2019
21
September, 2018
14
August, 2017
14
December, 2017
10
November, 2019
5
May, 2019
2
June, 2019
2
November, 2017
1
March, 2020
1
May, 2021
Available data
113
bam
110
bigWig
108
bed narrowPeak
51
fastq
49
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
tagAlign
3
bed bed3+
Organism
109
Homo sapiens
Biosample type
63
primary cell
20
tissue
14
in vitro differentiated cells
12
cell line
Organ
136
pancreas
97
heart
89
epithelium
88
brain
71
vasculature
70
blood vessel
59
connective tissue
49
limb
44
liver
30
kidney
25
adipose tissue
24
nerve
20
artery
20
musculature of body
15
vein
12
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
Project
107
AMP
2
T1D
Genome assembly (visualization)
106
hg19
104
GRCh38
Lab
109
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
Audit category:
21
missing controlled_by
Audit category:
5
inconsistent control read length
files.file_type!
tagAlign
BIOSAMPLE
ASSAY
109 results
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Clear Filters
ChIP-seq
primary cell
endothelial cell of umbilical vein
15
pancreatic ductal cell
13
pancreatic acinar cell
8
epithelial cell of proximal tubule
7
pancreatic alpha cell
7
+ See 5 more…
tissue
tibial artery
18
coronary artery
2
in vitro differentiated cells
hepatocyte
12
Hepatic endoderm
2
cell line
EndoC_BH1
12
See all biosamples
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