Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
snATAC-seq
2
DNase-seq
2
Hi-C
1
ATAC-seq
1
FAIRE-seq
Assay category
DNA binding
12
DNA accessibility
2
3D chromatin structure
Date released
8
January, 2021
4
October, 2019
1
January, 2018
1
March, 2020
Available data
4
bigWig
3
bam
3
bed narrowPeak
3
bigBed narrowPeak
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
2
hic
1
bedpe bed3+
1
tar
Organism
14
Homo sapiens
Biosample type
13
primary cell
1
cell line
Organ
728
pancreas
531
connective tissue
418
adipose tissue
395
epithelium
302
kidney
259
heart
239
liver
159
bone element
134
vasculature
131
blood vessel
107
artery
68
brain
57
musculature of body
56
eye
56
limb
20
lung
18
ureter
16
skeleton
15
embryo
9
blood
9
bodily fluid
8
nerve
5
spleen
5
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
8
T1D
6
AMP
Genome assembly (visualization)
6
hg19
2
GRCh38
Lab
8
Kyle Gaulton, UCSD
6
AMP-T2D consortium
Audit category:
1
audit script error
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
14 results
search-icon
table-tab-icon
Clear Filters
snATAC-seq
DNase-seq
Hi-C
ATAC-seq
FAIRE-seq
primary cell
peripheral blood mononuclear cell
8
endothelial cell of umbilical vein
2
2
1
cell line
GM12878
1
Download