Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
27
DNA binding
9
DNA accessibility
Target of assay
26
transcription factor
8
RNA binding protein
8
chromatin remodeller
control
1
histone
1
histone modification
1
narrow histone mark
Date released
December, 2018
15
January, 2019
12
November, 2018
8
January, 2021
1
January, 2018
Available data
28
bigWig
27
bam
27
bed narrowPeak
27
bigBed narrowPeak
27
fastq
Organism
36
Homo sapiens
Biosample type
28
cell line
8
primary cell
Organ
893
pancreas
682
liver
649
connective tissue
494
epithelium
467
adipose tissue
373
heart
342
kidney
255
brain
214
vasculature
209
blood vessel
159
bone element
132
artery
105
limb
90
musculature of body
60
eye
36
blood
36
bodily fluid
32
nerve
30
embryo
20
lung
20
vein
18
ureter
16
skeleton
14
spleen
5
gonad
5
ovary
2
intestine
2
pericardium
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
28
AMP
8
T1D
Genome assembly (visualization)
28
hg19
27
GRCh38
Lab
28
AMP-T2D consortium
8
Kyle Gaulton, UCSD
month_released!
December, 2018
organ_slims!
pituitary gland
target.investigated_as!
control
BIOSAMPLE
ASSAY
36 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
27
1
primary cell
peripheral blood mononuclear cell
8
Download