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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
ChIP-seq
8
snATAC-seq
2
ATAC-seq
Assay category
33
DNA binding
10
DNA accessibility
Target of assay
26
transcription factor
8
RNA binding protein
8
chromatin remodeller
6
control
1
histone
1
histone modification
1
narrow histone mark
Date released
December, 2018
18
January, 2019
15
November, 2018
8
January, 2021
1
January, 2018
1
October, 2019
Available data
33
bam
33
fastq
28
bigWig
27
bed narrowPeak
27
bigBed narrowPeak
Organism
43
Homo sapiens
Biosample type
34
cell line
8
primary cell
1
tissue
Organ
946
pancreas
790
liver
684
connective tissue
524
epithelium
491
adipose tissue
393
heart
354
kidney
286
brain
236
vasculature
230
blood vessel
159
bone element
141
artery
122
limb
96
musculature of body
61
eye
43
nerve
42
blood
42
bodily fluid
37
embryo
22
vein
20
lung
18
spleen
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
35
AMP
8
T1D
Genome assembly (visualization)
28
hg19
27
GRCh38
Lab
35
AMP-T2D consortium
8
Kyle Gaulton, UCSD
month_released!
December, 2018
BIOSAMPLE
ASSAY
43 results
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ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
33
1
primary cell
peripheral blood mononuclear cell
8
tissue
islet of Langerhans
1
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