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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
42
DNA binding
9
DNA accessibility
Target of assay
39
transcription factor
8
RNA binding protein
8
chromatin remodeller
control
1
histone
1
histone modification
1
narrow histone mark
Date released
27
December, 2018
15
January, 2019
November, 2018
8
January, 2021
1
January, 2018
Available data
43
bigWig
42
bam
42
bed narrowPeak
42
bigBed narrowPeak
42
fastq
Organism
51
Homo sapiens
Biosample type
43
cell line
8
primary cell
Organ
886
pancreas
648
connective tissue
630
liver
494
epithelium
466
adipose tissue
373
heart
342
kidney
253
brain
214
vasculature
209
blood vessel
159
bone element
132
artery
105
limb
90
musculature of body
60
eye
51
blood
51
bodily fluid
32
nerve
30
embryo
20
lung
20
vein
18
ureter
16
skeleton
11
spleen
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
urinary bladder
Project
43
AMP
8
T1D
Genome assembly (visualization)
43
hg19
42
GRCh38
Lab
43
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
month_released!
November, 2018
organ_slims!
urinary bladder
target.investigated_as!
control
BIOSAMPLE
ASSAY
51 results
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ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
42
1
primary cell
peripheral blood mononuclear cell
8
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