Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
102
ChIP-seq
36
DNase-seq
4
total RNA-seq
3
ATAC-seq
1
WGBS
Assay category
102
DNA binding
39
DNA accessibility
4
Transcription
1
DNA methylation
Target of assay
51
transcription factor
49
histone
49
histone modification
34
broad histone mark
15
narrow histone mark
10
RNA binding protein
10
chromatin remodeller
Date released
52
October, 2019
32
June, 2019
27
December, 2018
15
January, 2019
12
November, 2018
6
May, 2019
1
January, 2018
1
July, 2019
Available data
174
bam
146
bed narrowPeak
146
bigWig
138
bigBed narrowPeak
60
fastq
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
146
Homo sapiens
Biosample type
91
tissue
55
cell line
Organ
623
pancreas
622
liver
570
connective tissue
425
adipose tissue
301
epithelium
222
brain
184
heart
155
vasculature
150
blood vessel
131
kidney
91
limb
85
artery
68
musculature of body
58
bone element
55
blood
55
bodily fluid
31
nerve
29
embryo
18
ureter
16
spleen
15
vein
6
eye
1
pericardium
1
pituitary gland
Project
146
AMP
Genome assembly (visualization)
145
hg19
144
GRCh38
Lab
146
AMP-T2D consortium
Audit category:
1
inconsistent control
1
inconsistent ontology term
BIOSAMPLE
ASSAY
146 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
WGBS
tissue
tibial nerve
24
2
4
1
tibial artery
18
2
1
muscle of leg
6
13
1
muscle of arm
17
forelimb muscle
1
+ See 1 more…
cell line
GM12878
54
1
See all biosamples
Download