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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
50
ChIP-seq
18
DNase-seq
8
snATAC-seq
1
ATAC-seq
Assay category
50
DNA binding
27
DNA accessibility
Target of assay
51
transcription factor
10
RNA binding protein
chromatin remodeller
6
control
1
histone
1
histone modification
1
narrow histone mark
Date released
25
December, 2018
18
June, 2019
13
November, 2018
12
January, 2019
8
January, 2021
1
January, 2018
Available data
68
bam
63
bigWig
62
bed narrowPeak
62
bigBed narrowPeak
50
fastq
18
bed bed3+
18
bed broadPeak
18
bigBed broadPeak
Organism
77
Homo sapiens
Biosample type
51
cell line
18
tissue
8
primary cell
Organ
946
pancreas
768
liver
682
connective tissue
523
epithelium
491
adipose tissue
354
kidney
353
heart
286
brain
236
vasculature
230
blood vessel
159
bone element
141
artery
122
limb
96
musculature of body
61
eye
59
blood
59
bodily fluid
43
nerve
37
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
69
AMP
8
T1D
Genome assembly (visualization)
63
hg19
62
GRCh38
Lab
69
AMP-T2D consortium
8
Kyle Gaulton, UCSD
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
77 results
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Clear Filters
ChIP-seq
DNase-seq
snATAC-seq
ATAC-seq
cell line
GM12878
50
1
tissue
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
primary cell
peripheral blood mononuclear cell
8
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