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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
4
DNase-seq
2
total RNA-seq
Assay category
12
DNA binding
4
DNA accessibility
2
Transcription
Target of assay
11
histone
11
histone modification
6
narrow histone mark
5
broad histone mark
1
RNA binding protein
1
transcription factor
Date released
12
October, 2019
2
July, 2019
2
June, 2019
2
November, 2017
Available data
18
bam
18
bigWig
16
bed narrowPeak
16
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
4
bed bed3+
2
fastq
2
tsv
Organism
18
Homo sapiens
Biosample type
105
tissue
64
cell line
18
primary cell
Organ
225
epithelium
192
pancreas
32
connective tissue
28
kidney
22
vasculature
18
blood vessel
14
brain
12
vein
11
liver
11
musculature of body
10
heart
3
eye
2
adipose tissue
2
artery
1
pericardium
Project
18
AMP
Genome assembly (visualization)
21
hg19
18
GRCh38
Lab
18
AMP-T2D consortium
assay_slims!
3D chromatin structure
BIOSAMPLE
ASSAY
18 results
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ChIP-seq
DNase-seq
total RNA-seq
primary cell
endothelial cell of umbilical vein
10
2
brain microvascular endothelial cell
2
1
endothelial cell of coronary artery
1
kidney capillary endothelial cell
1
smooth muscle cell of the coronary artery
1
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