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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
74
ChIP-seq
46
ATAC-seq
9
DNase-seq
2
WGBS
1
FAIRE-seq
Assay category
74
DNA binding
56
DNA accessibility
3D chromatin structure
2
DNA methylation
Target of assay
70
histone
70
histone modification
45
broad histone mark
narrow histone mark
21
control
8
transcription factor
4
RNA binding protein
Date released
36
May, 2019
36
October, 2019
35
February, 2023
14
February, 2021
5
June, 2019
4
July, 2019
2
November, 2017
Available data
155
bam
124
bigWig
105
bed narrowPeak
tsv
55
bigBed narrowPeak
12
bed broadPeak
12
bigBed broadPeak
9
bed bed3+
6
tagAlign
2
fastq
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
132
Homo sapiens
Biosample type
100
tissue
18
primary cell
14
cell line
Organ
553
liver
447
pancreas
314
kidney
311
epithelium
182
heart
172
connective tissue
140
brain
137
vasculature
132
blood vessel
101
bone element
96
limb
78
adipose tissue
77
artery
68
blood
68
bodily fluid
68
musculature of body
53
eye
30
nerve
22
spleen
19
lung
18
ureter
16
skeleton
15
embryo
14
vein
1
bone marrow
1
pericardium
1
pituitary gland
1
skin of body
1
thymus
Project
132
AMP
Genome assembly (visualization)
105
GRCh38
72
hg19
Lab
132
AMP-T2D consortium
assay_slims!
3D chromatin structure
target.investigated_as!
narrow histone mark
files.file_type!
tsv
BIOSAMPLE
ASSAY
132 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
WGBS
FAIRE-seq
tissue
coronary artery
3
36
2
tibial artery
19
1
2
ascending aorta
12
1
thoracic aorta
12
1
aorta
9
2
primary cell
endothelial cell of umbilical vein
11
2
1
brain microvascular endothelial cell
2
1
kidney capillary endothelial cell
1
cell line
smooth muscle cell of the coronary artery
6
8
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