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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
73
ChIP-seq
total RNA-seq
46
ATAC-seq
9
DNase-seq
1
WGBS
Assay category
73
DNA binding
55
DNA accessibility
1
DNA methylation
Target of assay
65
histone
65
histone modification
41
broad histone mark
24
narrow histone mark
8
transcription factor
4
RNA binding protein
Date released
39
May, 2019
35
February, 2023
33
October, 2019
12
February, 2021
5
June, 2019
3
July, 2019
2
November, 2017
Available data
128
bed narrowPeak
94
bam
86
bigWig
78
bigBed narrowPeak
11
bed broadPeak
11
bigBed broadPeak
9
bed bed3+
4
tagAlign
2
fastq
1
bed bedMethyl
1
bigBed bedMethyl
Organism
129
Homo sapiens
Biosample type
101
tissue
16
primary cell
12
cell line
Organ
372
liver
311
pancreas
218
epithelium
212
brain
197
heart
194
kidney
133
vasculature
129
blood vessel
98
connective tissue
92
limb
74
artery
54
blood
54
bodily fluid
49
musculature of body
28
adipose tissue
27
nerve
18
ureter
16
spleen
15
embryo
12
vein
8
bone element
8
skeleton
6
eye
1
pituitary gland
0
small intestine
Project
129
AMP
Genome assembly (visualization)
129
GRCh38
101
hg19
Lab
129
AMP-T2D consortium
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
129 results
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ChIP-seq
ATAC-seq
DNase-seq
WGBS
tissue
coronary artery
3
36
2
tibial artery
18
1
2
ascending aorta
13
1
thoracic aorta
12
1
aorta
11
1
primary cell
endothelial cell of umbilical vein
10
2
brain microvascular endothelial cell
2
1
kidney capillary endothelial cell
1
cell line
smooth muscle cell of the coronary artery
4
8
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