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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
99
ChIP-seq
61
total RNA-seq
46
ATAC-seq
9
DNase-seq
6
single cell RNA-seq
5
Hi-C
2
WGBS
1
FAIRE-seq
1
pCHi-C
Assay category
9
DNA accessibility
5
3D chromatin structure
Date released
5
June, 2019
5
October, 2019
2
July, 2019
2
March, 2020
Available data
11
bed bed3+
11
bigWig
9
bam
9
bed broadPeak
9
bed narrowPeak
9
bigBed broadPeak
9
bigBed narrowPeak
3
hic
2
bedpe bed3+
2
hdf5
Organism
14
Homo sapiens
Biosample type
8
primary cell
6
tissue
Organ
82
kidney
40
limb
39
musculature of body
35
brain
33
heart
27
epithelium
18
ureter
17
pancreas
16
vasculature
14
blood vessel
10
connective tissue
10
liver
4
artery
4
eye
4
vein
2
adipose tissue
2
nerve
1
spleen
Project
14
AMP
Genome assembly (visualization)
13
hg19
9
GRCh38
Lab
14
AMP-T2D consortium
Audit category:
1
audit script error
BIOSAMPLE
ASSAY
14 results
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DNase-seq
Hi-C
primary cell
endothelial cell of umbilical vein
2
2
brain microvascular endothelial cell
1
1
endothelial cell of hepatic sinusoid
1
kidney capillary endothelial cell
1
tissue
coronary artery
2
tibial artery
2
aorta
1
ascending aorta
1
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