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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
4
DNase-seq
Hi-C
2
total RNA-seq
1
FAIRE-seq
Assay category
20
DNA binding
5
DNA accessibility
2
Transcription
Target of assay
16
histone
16
histone modification
9
broad histone mark
7
narrow histone mark
3
control
1
RNA binding protein
1
transcription factor
Date released
20
October, 2019
3
November, 2017
2
July, 2019
2
June, 2019
Available data
27
bam
22
bigWig
17
bed narrowPeak
17
bigBed narrowPeak
8
bed broadPeak
8
bigBed broadPeak
4
bed bed3+
3
fastq
2
tsv
1
tar
Organism
27
Homo sapiens
Biosample type
132
tissue
66
cell line
27
primary cell
Organ
399
epithelium
343
pancreas
38
connective tissue
36
kidney
33
vasculature
27
blood vessel
20
vein
18
brain
14
musculature of body
13
heart
13
liver
8
blood
8
bodily fluid
5
eye
2
adipose tissue
2
artery
1
bone element
1
bone marrow
1
pericardium
Project
27
AMP
Genome assembly (visualization)
21
hg19
18
GRCh38
Lab
27
AMP-T2D consortium
assay_title!
Hi-C
BIOSAMPLE
ASSAY
27 results
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ChIP-seq
DNase-seq
total RNA-seq
FAIRE-seq
primary cell
endothelial cell of umbilical vein
17
2
1
brain microvascular endothelial cell
3
1
endothelial cell of coronary artery
1
kidney capillary endothelial cell
1
smooth muscle cell of the coronary artery
1
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