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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ChIP-seq
5
Hi-C
1
FAIRE-seq
1
WGBS
Assay category
26
DNA binding
5
3D chromatin structure
1
DNA accessibility
1
DNA methylation
Target of assay
21
control
5
histone
5
histone modification
4
broad histone mark
1
narrow histone mark
Date released
14
October, 2019
11
May, 2019
3
July, 2019
2
February, 2021
2
March, 2020
1
November, 2017
Available data
28
bam
tsv
6
bigWig
3
hic
2
bed bed3+
2
bed broadPeak
2
bedpe bed3+
2
bigBed broadPeak
2
hdf5
2
tagAlign
1
bed narrowPeak
1
bigBed narrowPeak
1
fastq
1
tar
Organism
33
Homo sapiens
Biosample type
18
tissue
13
primary cell
2
cell line
Organ
300
pancreas
248
liver
220
epithelium
137
kidney
114
connective tissue
93
bone element
64
adipose tissue
55
brain
50
eye
40
musculature of body
35
vasculature
33
blood vessel
29
heart
23
limb
19
lung
15
blood
15
bodily fluid
11
nerve
10
vein
9
artery
8
embryo
8
skeleton
8
spleen
4
gonad
4
ovary
1
bone marrow
1
lymph node
1
pericardium
1
pituitary gland
1
skin of body
1
thymus
Project
33
AMP
Genome assembly (visualization)
GRCh38
101
hg19
Lab
33
AMP-T2D consortium
Audit category:
1
audit script error
files.file_type!
tsv
assembly!
GRCh38
BIOSAMPLE
ASSAY
33 results
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Clear Filters
ChIP-seq
Hi-C
FAIRE-seq
WGBS
tissue
tibial artery
5
aorta
2
1
1
thoracic aorta
4
ascending aorta
3
coronary artery
2
primary cell
endothelial cell of umbilical vein
7
2
1
brain microvascular endothelial cell
1
1
endothelial cell of hepatic sinusoid
1
cell line
smooth muscle cell of the coronary artery
2
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