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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
4
DNase-seq
1
FAIRE-seq
Assay category
12
DNA binding
5
DNA accessibility
Target of assay
11
histone
11
histone modification
6
narrow histone mark
5
broad histone mark
1
RNA binding protein
1
transcription factor
Date released
13
October, 2019
2
June, 2019
2
November, 2017
Available data
27
bam
24
bigWig
17
bed narrowPeak
17
bigBed narrowPeak
8
bed broadPeak
8
bigBed broadPeak
6
bed bed3+
3
fastq
2
hdf5
2
hic
2
tsv
1
bedpe bed3+
1
tar
Organism
17
Homo sapiens
Biosample type
100
tissue
17
primary cell
12
cell line
Organ
106
epithelium
68
pancreas
22
kidney
21
vasculature
17
blood vessel
17
connective tissue
13
vein
11
brain
9
musculature of body
6
heart
6
liver
3
eye
Project
17
AMP
Genome assembly (visualization)
16
GRCh38
16
hg19
Lab
17
AMP-T2D consortium
BIOSAMPLE
ASSAY
17 results
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ChIP-seq
DNase-seq
FAIRE-seq
primary cell
endothelial cell of umbilical vein
10
2
1
brain microvascular endothelial cell
2
1
kidney capillary endothelial cell
1
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