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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
73
ChIP-seq
46
ATAC-seq
9
DNase-seq
1
FAIRE-seq
1
WGBS
Assay category
73
DNA binding
56
DNA accessibility
1
DNA methylation
Target of assay
65
histone
65
histone modification
41
broad histone mark
24
narrow histone mark
8
transcription factor
4
RNA binding protein
Date released
39
May, 2019
35
February, 2023
34
October, 2019
12
February, 2021
5
June, 2019
3
July, 2019
2
November, 2017
Available data
180
bam
150
bigWig
129
bed narrowPeak
79
bigBed narrowPeak
68
tsv
13
bed broadPeak
13
bigBed broadPeak
11
bed bed3+
6
tagAlign
3
fastq
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
130
Homo sapiens
Biosample type
101
tissue
17
primary cell
12
cell line
Organ
444
liver
220
pancreas
205
brain
187
kidney
159
heart
157
epithelium
135
vasculature
130
blood vessel
93
limb
78
connective tissue
74
artery
64
musculature of body
54
blood
54
bodily fluid
34
eye
27
nerve
18
ureter
16
spleen
15
adipose tissue
14
embryo
13
vein
8
bone element
8
skeleton
1
pericardium
1
pituitary gland
Project
130
AMP
Genome assembly (visualization)
129
GRCh38
93
hg19
Lab
130
AMP-T2D consortium
BIOSAMPLE
ASSAY
130 results
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ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
WGBS
tissue
coronary artery
3
36
2
tibial artery
18
1
2
ascending aorta
13
1
thoracic aorta
12
1
aorta
11
1
primary cell
endothelial cell of umbilical vein
10
2
1
brain microvascular endothelial cell
2
1
kidney capillary endothelial cell
1
cell line
smooth muscle cell of the coronary artery
4
8
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