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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ATAC-seq
45
ChIP-seq
5
DNase-seq
Assay category
50
DNA accessibility
45
DNA binding
Target of assay
37
histone
37
histone modification
22
broad histone mark
15
narrow histone mark
8
transcription factor
4
RNA binding protein
Date released
39
May, 2019
35
February, 2023
October, 2019
12
February, 2021
5
June, 2019
2
July, 2019
2
November, 2017
Available data
134
bam
114
bigWig
95
bed narrowPeak
68
tsv
46
bigBed narrowPeak
7
bed bed3+
7
bed broadPeak
7
bigBed broadPeak
6
tagAlign
3
fastq
2
bedpe bed3+
2
hdf5
2
hic
1
bed bedMethyl
1
bigBed bedMethyl
Organism
95
Homo sapiens
Biosample type
79
tissue
12
cell line
4
primary cell
Organ
435
liver
207
pancreas
167
kidney
146
heart
130
epithelium
128
brain
99
vasculature
95
blood vessel
75
connective tissue
60
musculature of body
54
blood
54
bodily fluid
53
artery
44
limb
33
eye
18
ureter
14
embryo
14
spleen
13
adipose tissue
8
bone element
8
skeleton
Project
95
AMP
Genome assembly (visualization)
95
GRCh38
59
hg19
Lab
95
AMP-T2D consortium
month_released!
October, 2019
BIOSAMPLE
ASSAY
95 results
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ATAC-seq
ChIP-seq
DNase-seq
tissue
coronary artery
36
3
2
ascending aorta
13
1
thoracic aorta
1
12
aorta
11
cell line
smooth muscle cell of the coronary artery
8
4
primary cell
brain microvascular endothelial cell
2
1
kidney capillary endothelial cell
1
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