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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
119
total RNA-seq
6
single cell RNA-seq
1
pCHi-C
Assay category
125
Transcription
Date released
110
February, 2021
6
August, 2021
5
July, 2019
3
February, 2020
2
March, 2020
Available data
246
bam
208
bigWig
137
bed narrowPeak
126
tsv
88
txt
79
bigBed narrowPeak
13
bed broadPeak
13
bigBed broadPeak
11
bed bed3+
6
tagAlign
4
bed bed3
3
fastq
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
126
Homo sapiens
Biosample type
72
tissue
52
cell line
2
primary cell
Organ
478
connective tissue
417
pancreas
401
adipose tissue
174
liver
168
heart
156
epithelium
68
blood vessel
68
vasculature
58
artery
58
bone element
26
brain
24
kidney
14
embryo
9
musculature of body
7
limb
5
eye
5
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
126
AMP
Genome assembly (visualization)
116
GRCh38
116
hg19
Lab
126
AMP-T2D consortium
BIOSAMPLE
ASSAY
126 results
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total RNA-seq
single cell RNA-seq
pCHi-C
tissue
bone tissue
58
aorta
1
4
1
ascending aorta
2
pulmonary artery
2
thoracic aorta
2
+ See 2 more…
cell line
smooth muscle cell of the coronary artery
52
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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