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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
ChIP-seq
4
DNase-seq
1
ATAC-seq
1
FAIRE-seq
1
Hi-C
Assay category
43
DNA binding
6
DNA accessibility
1
3D chromatin structure
Target of assay
34
histone
34
histone modification
23
broad histone mark
11
narrow histone mark
8
control
1
RNA binding protein
1
transcription factor
Date released
66
February, 2021
50
May, 2019
47
October, 2019
35
February, 2023
11
July, 2019
6
August, 2021
5
June, 2019
4
March, 2020
3
February, 2020
3
November, 2017
Available data
49
bam
39
bigWig
36
bed narrowPeak
35
bigBed narrowPeak
8
bed broadPeak
8
bigBed broadPeak
4
bed bed3+
3
fastq
1
hic
1
tar
Organism
50
Homo sapiens
Biosample type
26
tissue
24
primary cell
Organ
322
liver
177
brain
69
limb
53
vasculature
50
blood vessel
42
nerve
41
epithelium
30
kidney
26
artery
21
eye
21
vein
18
pancreas
8
heart
4
connective tissue
4
gonad
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
50
AMP
Genome assembly (visualization)
40
hg19
35
GRCh38
Lab
50
AMP-T2D consortium
Audit category:
1
audit script error
BIOSAMPLE
ASSAY
50 results
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ChIP-seq
DNase-seq
ATAC-seq
FAIRE-seq
Hi-C
tissue
tibial artery
23
2
1
primary cell
endothelial cell of umbilical vein
17
2
1
1
brain microvascular endothelial cell
3
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