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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
7
DNase-seq
1
FAIRE-seq
Assay category
66
DNA binding
8
DNA accessibility
Target of assay
63
histone
63
histone modification
41
broad histone mark
22
narrow histone mark
3
RNA binding protein
3
transcription factor
Date released
36
May, 2019
33
October, 2019
3
June, 2019
2
November, 2017
Available data
104
bam
86
bigWig
76
bed narrowPeak
74
bigBed narrowPeak
13
tsv
11
bed broadPeak
11
bigBed broadPeak
9
bed bed3+
3
fastq
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
74
Homo sapiens
Biosample type
57
tissue
17
primary cell
Organ
358
liver
127
brain
104
kidney
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
74
AMP
Genome assembly (visualization)
73
GRCh38
73
hg19
Lab
74
AMP-T2D consortium
organ_slims!
heart
BIOSAMPLE
ASSAY
74 results
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ChIP-seq
DNase-seq
FAIRE-seq
tissue
tibial artery
18
2
ascending aorta
13
1
thoracic aorta
12
aorta
11
primary cell
endothelial cell of umbilical vein
10
2
1
brain microvascular endothelial cell
2
1
kidney capillary endothelial cell
1
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