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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
ChIP-seq
9
DNase-seq
1
FAIRE-seq
Assay category
30
DNA binding
10
DNA accessibility
Target of assay
29
histone
29
histone modification
19
broad histone mark
10
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
May, 2019
33
October, 2019
5
June, 2019
2
November, 2017
Available data
130
bam
111
bigWig
90
bed narrowPeak
68
tsv
40
bigBed narrowPeak
13
bed broadPeak
13
bigBed broadPeak
11
bed bed3+
6
tagAlign
3
fastq
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
40
Homo sapiens
Biosample type
23
tissue
17
primary cell
Organ
358
liver
102
brain
100
kidney
90
pancreas
79
heart
78
limb
72
epithelium
54
blood
54
bodily fluid
44
vasculature
41
musculature of body
40
blood vessel
28
connective tissue
26
nerve
22
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
40
AMP
Genome assembly (visualization)
39
GRCh38
39
hg19
Lab
40
AMP-T2D consortium
organ_slims!
small intestine
month_released!
May, 2019
BIOSAMPLE
ASSAY
40 results
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ChIP-seq
DNase-seq
FAIRE-seq
tissue
tibial artery
18
2
coronary artery
2
ascending aorta
1
primary cell
endothelial cell of umbilical vein
10
2
1
brain microvascular endothelial cell
2
1
kidney capillary endothelial cell
1
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