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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
129
ChIP-seq
Assay category
129
DNA binding
Target of assay
346
transcription factor
173
histone modification
172
histone
129
control
87
broad histone mark
85
narrow histone mark
82
recombinant protein
62
RNA binding protein
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
57
November, 2017
23
May, 2020
13
December, 2017
11
August, 2017
11
May, 2019
7
October, 2019
5
August, 2021
2
February, 2021
Available data
122
bam
78
fastq
30
tagAlign
14
bigWig
1
bed bed3+
Organism
129
Homo sapiens
Biosample type
62
cell line
62
tissue
4
primary cell
1
in vitro differentiated cells
Organ
108
liver
53
pancreas
35
connective tissue
31
brain
30
epithelium
24
adipose tissue
22
vasculature
21
blood vessel
20
heart
17
limb
12
kidney
11
nerve
9
artery
8
spleen
7
embryo
6
blood
6
bodily fluid
6
musculature of body
2
vein
1
eye
Project
129
AMP
Genome assembly (visualization)
15
hg19
1
GRCh38
Lab
125
AMP-T2D consortium
4
Bing Ren, UCSD
BIOSAMPLE
ASSAY
129 results
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ChIP-seq
cell line
HepG2
60
smooth muscle cell of the coronary artery
2
tissue
liver
43
tibial artery
5
thoracic aorta
4
ascending aorta
3
right lobe of liver
3
+ See 2 more…
primary cell
endothelial cell of umbilical vein
2
brain microvascular endothelial cell
1
hepatocyte
1
in vitro differentiated cells
hepatocyte
1
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