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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
ChIP-seq
Assay category
106
DNA binding
Target of assay
346
transcription factor
146
histone modification
145
histone
106
control
87
broad histone mark
82
recombinant protein
62
RNA binding protein
58
narrow histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
57
November, 2017
May, 2020
13
December, 2017
11
August, 2017
11
May, 2019
7
October, 2019
5
August, 2021
2
February, 2021
Available data
99
bam
78
fastq
14
bigWig
7
tagAlign
1
bed bed3+
Organism
106
Homo sapiens
Biosample type
62
cell line
39
tissue
4
primary cell
1
in vitro differentiated cells
Organ
85
liver
53
pancreas
35
connective tissue
31
brain
30
epithelium
24
adipose tissue
22
vasculature
21
blood vessel
20
heart
17
limb
12
kidney
11
nerve
9
artery
8
spleen
7
embryo
6
blood
6
bodily fluid
6
musculature of body
2
vein
1
eye
Project
106
AMP
Genome assembly (visualization)
15
hg19
1
GRCh38
Lab
102
AMP-T2D consortium
4
Bing Ren, UCSD
month_released!
May, 2020
BIOSAMPLE
ASSAY
106 results
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ChIP-seq
cell line
HepG2
60
smooth muscle cell of the coronary artery
2
tissue
liver
20
tibial artery
5
thoracic aorta
4
ascending aorta
3
right lobe of liver
3
+ See 2 more…
primary cell
endothelial cell of umbilical vein
2
brain microvascular endothelial cell
1
hepatocyte
1
in vitro differentiated cells
hepatocyte
1
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