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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
ChIP-seq
5
ATAC-seq
4
DNase-seq
1
FAIRE-seq
1
Hi-C
Assay category
42
DNA binding
10
DNA accessibility
1
3D chromatin structure
Target of assay
35
histone
35
histone modification
23
broad histone mark
12
narrow histone mark
7
control
Date released
521
February, 2021
125
August, 2017
53
October, 2019
50
May, 2019
49
February, 2023
29
July, 2019
23
June, 2019
23
October, 2018
11
August, 2021
6
March, 2020
6
November, 2020
5
February, 2020
3
November, 2017
2
April, 2018
2
July, 2018
2
May, 2021
1
August, 2018
1
January, 2018
1
May, 2023
1
November, 2018
1
November, 2019
1
October, 2017
Available data
47
bam
40
bigWig
36
bigBed narrowPeak
35
bed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
4
bed bed3+
1
hic
1
tagAlign
1
tar
Organism
53
Homo sapiens
Biosample type
30
tissue
21
primary cell
2
in vitro differentiated cells
Organ
86
brain
69
limb
47
blood vessel
47
vasculature
42
nerve
35
epithelium
30
kidney
26
artery
21
eye
21
vein
18
pancreas
8
heart
7
liver
4
connective tissue
4
gonad
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
53
AMP
Genome assembly (visualization)
41
hg19
34
GRCh38
Lab
53
AMP-T2D consortium
Audit category:
1
audit script error
BIOSAMPLE
ASSAY
53 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
Hi-C
tissue
tibial artery
23
1
2
islet of Langerhans
1
1
adipose tissue
1
pituitary gland
1
primary cell
endothelial cell of umbilical vein
17
2
1
1
in vitro differentiated cells
adipocyte
2
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