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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
Assay category
59
DNA binding
Target of assay
149
histone
149
histone modification
89
broad histone mark
59
narrow histone mark
56
control
48
transcription factor
14
RNA binding protein
2
chromatin remodeller
Date released
28
August, 2017
14
May, 2019
12
October, 2019
4
June, 2019
1
November, 2017
Available data
43
bam
43
bed narrowPeak
43
bigWig
29
bigBed narrowPeak
14
fastq
8
tagAlign
2
bed broadPeak
1
bigBed broadPeak
Organism
59
Homo sapiens
Biosample type
32
tissue
16
in vitro differentiated cells
11
primary cell
Organ
117
brain
73
pancreas
60
liver
49
epithelium
40
heart
33
connective tissue
26
vasculature
25
blood vessel
15
kidney
15
limb
13
musculature of body
12
adipose tissue
8
embryo
8
nerve
6
artery
6
vein
4
gonad
4
ovary
3
eye
2
spleen
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
59
AMP
Genome assembly (visualization)
43
hg19
42
GRCh38
Lab
59
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
BIOSAMPLE
ASSAY
59 results
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ChIP-seq
tissue
subcutaneous abdominal adipose tissue
11
aorta
4
ascending aorta
4
thoracic aorta
4
tibial artery
4
+ See 4 more…
in vitro differentiated cells
adipocyte
16
primary cell
endothelial cell of umbilical vein
6
cardiac fibroblast
2
mesenchymal stem cell
2
brain microvascular endothelial cell
1
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