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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
69
ChIP-seq
9
DNase-seq
1
FAIRE-seq
1
WGBS
Assay category
69
DNA binding
10
DNA accessibility
1
DNA methylation
Target of assay
65
histone
65
histone modification
41
broad histone mark
24
narrow histone mark
4
RNA binding protein
4
transcription factor
Date released
39
May, 2019
33
October, 2019
5
June, 2019
2
November, 2017
1
July, 2019
Available data
180
bam
150
bigWig
129
bed narrowPeak
79
bigBed narrowPeak
69
tsv
13
bed broadPeak
13
bigBed broadPeak
11
bed bed3+
6
tagAlign
3
fastq
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
80
Homo sapiens
Biosample type
63
tissue
17
primary cell
Organ
361
liver
129
brain
108
kidney
102
heart
97
pancreas
85
limb
85
vasculature
82
epithelium
80
blood vessel
54
blood
54
bodily fluid
51
musculature of body
31
connective tissue
26
nerve
25
artery
18
ureter
15
spleen
13
vein
12
adipose tissue
7
eye
1
pericardium
0
urinary bladder
Project
80
AMP
Genome assembly (visualization)
79
GRCh38
78
hg19
Lab
80
AMP-T2D consortium
BIOSAMPLE
ASSAY
80 results
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ChIP-seq
DNase-seq
FAIRE-seq
WGBS
tissue
tibial artery
18
2
ascending aorta
13
1
aorta
11
1
thoracic aorta
12
coronary artery
3
2
primary cell
endothelial cell of umbilical vein
10
2
1
brain microvascular endothelial cell
2
1
kidney capillary endothelial cell
1
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